hsa-mir-98

Reverse strand
53583302 AGGAUUCUGC UCAUGCCAGG GUGAGGUAGU AAGUUGUAUU GUUGUGGGGU
53583252 AGGGAUAUUA GGCCCCAAUU AGAAGAUAAC UAUACAACUU ACUACUUUCC
53583202 CUGGUGUGUG GCAUAUUCA

Expression profile across tissues

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Download expression profile (CSV)

Read coverage profile across tissues

Tissue
Read count
RPM
wholeislet1
2271.06
560.62
wholeblood1
4836.07
15.16
testiculargerm1
8082.93
75.27
spleen1
253.483
15.61
spermatozoa1
0
0.00
skin2
7716.99
245.11
skin1
63409.8
347.49
serum2
1853.26
175.20
serum1
2867.37
379.99
plasma1
18353
861.41
peripheralbmc2
3013.64
314.04
peripheralbmc1
58
16.75
pancreaticislet1
113889
1261.88
pancreaticbetacell1
95820.9
1335.66
pancreas1
228.831
137.93
muscle1
137.382
20.77
monocytemacrophage1
3957.76
445.65
lung2
1651.14
375.28
lung1
66843.6
533.36
liver3
877.396
27.27
liver2
89.6111
33.32
liver1
520.178
60.37
kidney2
7458.98
95.16
kidney1
1757.34
220.29
heart2
154.106
35.13
heart1
1278.68
69.35
colonrectum1
2915.32
133.58
coloncoecum1
3763.77
136.36
colonascendens1
5878.93
187.63
colon2
22895.2
432.34
colon1
14664
149.25
cd4plustcell1
31596
1700.83
breast1
3560.57
233.17
braintgm1
13285.1
1654.15
brainpfc2
84501.6
2921.56
brainpfc1
77138.9
1815.40
brainog1
1110.21
428.60
bladder1
2092.99
71.39
bcellplasma1
233
82.96
bcellnaive1
222.889
77.66
bcellmemory1
121.833
45.07
bcellgerminalcenter1
629.125
182.60
adipose1
69839.9
969.23

Download expression table (CSV)
741829 reads
18879 reads per million
42 tissues
average 449 reads per million per tissue

Expression: hsa-mir-98 | testiculargerm1
Read count: 8082.93
5p entropy: 2.09446(max=4.32193)
3p entropy: 0.139767(max=3.32193)
Read coverage: hsa-mir-98 | testiculargerm1


Show raw read coverage data (bedgraph)

chrX	53583183	53583202	1
chrX	53583202	53583203	37
chrX	53583203	53583204	51.3333
chrX	53583204	53583205	52.3333
chrX	53583205	53583222	52.6667
chrX	53583222	53583223	36
chrX	53583239	53583252	3.5
chrX	53583252	53583253	6.5
chrX	53583253	53583254	8.5
chrX	53583254	53583255	26.5
chrX	53583255	53583256	30.5
chrX	53583256	53583257	32.5
chrX	53583257	53583258	36.5
chrX	53583258	53583259	65.5
chrX	53583259	53583260	4295
chrX	53583260	53583261	5741.83
chrX	53583261	53583262	6334.17
chrX	53583262	53583263	6426.28
chrX	53583263	53583264	7277.31
chrX	53583264	53583265	7307.64
chrX	53583265	53583266	8030.66
chrX	53583266	53583276	8032.76
chrX	53583276	53583277	8005.76
chrX	53583277	53583278	8003.6
chrX	53583278	53583279	8001.6
chrX	53583279	53583280	7996.49
chrX	53583280	53583281	7976.86
chrX	53583281	53583282	9
chrX	53583282	53583298	10
chrX	53583298	53583300	9
chrX	53583300	53583303	4

Show raw plot data

1	1	U	53583184
2	1	G
3	1	A
4	1	A
5	1	U
6	1	A
7	1	U
8	1	G
9	1	C
10	1	C	53583193
11	1	A
12	1	C
13	1	A
14	1	C
15	1	A
16	1	C
17	1	C
18	1	A
19	1	G
20	37	G	53583203
21	51.3333	G
22	52.3333	A
23	52.6667	A
24	52.6667	A
25	52.6667	G
26	52.6667	U
27	52.6667	A
28	52.6667	G
29	52.6667	U
30	52.6667	A	53583213
31	52.6667	A
32	52.6667	G
33	52.6667	U
34	52.6667	U
35	52.6667	G
36	52.6667	U
37	52.6667	A
38	52.6667	U
39	52.6667	A
40	36	G	53583223
41	0	U
42	0	U
43	0	A
44	0	U
45	0	C
46	0	U
47	0	U
48	0	C
49	0	U
50	0	A	53583233
51	0	A
52	0	U
53	0	U
54	0	G
55	0	G
56	0	G
57	3.5	G
58	3.5	C
59	3.5	C
60	3.5	U	53583243
61	3.5	A
62	3.5	A
63	3.5	U
64	3.5	A
65	3.5	U
66	3.5	C
67	3.5	C
68	3.5	C
69	3.5	U
70	6.5	A	53583253
71	8.5	C
72	26.5	C
73	30.5	C
74	32.5	C
75	36.5	A
76	65.5	C
77	4295	A
78	5741.83	A
79	6334.17	C
80	6426.28	A	53583263
81	7277.31	A
82	7307.64	U
83	8030.66	A
84	8032.76	C
85	8032.76	A
86	8032.76	A
87	8032.76	C
88	8032.76	U
89	8032.76	U
90	8032.76	A	53583273
91	8032.76	C
92	8032.76	U
93	8032.76	A
94	8005.76	C
95	8003.6	C
96	8001.6	U
97	7996.49	C
98	7976.86	A
99	9	C
100	10	C	53583283
101	10	C
102	10	U
103	10	G
104	10	G
105	10	C
106	10	A
107	10	U
108	10	G
109	10	A
110	10	G	53583293
111	10	C
112	10	A
113	10	G
114	10	A
115	10	A
116	9	U
117	9	C
118	4	C
119	4	U

RNA structure (SAVoR) | testiculargerm1