Whole-genome analysis database of small RNAs in human

Tissue	Read count	RPM
wholeislet1	213.333	52.66
wholeblood1	30.1105	0.09
testiculargerm1	1617.51	15.06
spleen1	214.217	13.19
spermatozoa1	1.25	0.21
skin2	14838.5	471.30
skin1	28262.6	154.88
serum2	6.07983	0.57
serum1	88.2514	11.70
plasma1	9.58183	0.45
peripheralbmc2	730.016	76.07
peripheralbmc1	276.765	79.92
pancreaticislet1	2383.15	26.41
pancreaticbetacell1	1257.65	17.53
pancreas1	44.1176	26.59
muscle1	8	1.21
monocytemacrophage1	758.925	85.46
lung2	129.766	29.49
lung1	18977.4	151.43
liver3	2064.18	64.15
liver2	60.8939	22.64
liver1	128.279	14.89
kidney2	1249.71	15.94
kidney1	125.385	15.72
heart2	8.5	1.94
heart1	65	3.53
colonrectum1	503.206	23.06
coloncoecum1	475.535	17.23
colonascendens1	517.698	16.52
colon2	1679.93	31.72
colon1	2906.51	29.58
cd4plustcell1	756.258	40.71
breast1	662.386	43.38
braintgm1	59.34	7.39
brainpfc2	1092.98	37.79
brainpfc1	2265.93	53.33
brainog1	20.3333	7.85
bladder1	1144.05	39.03
bcellplasma1	282.011	100.41
bcellnaive1	54.9739	19.15
bcellmemory1	40.7696	15.08
bcellgerminalcenter1	91.0513	26.43
adipose1	458.845	6.37

86560 reads
1868 reads per million
40 tissues
average 46 reads per million per tissue

Expression: U38B | skin1

Read count: 28262.6

5p entropy: 3.08358(max=5.35755)

3p entropy: 0.888719(max=4.70044)

Read coverage: U38B | skin1

chr1 45244060 45244061 3 chr1 45244061 45244062 1124.25 chr1 45244062 45244063 2393.37 chr1 45244063 45244064 2401.87 chr1 45244064 45244065 2403.87 chr1 45244065 45244066 2405.7 chr1 45244066 45244067 2407.87 chr1 45244067 45244068 2410.87 chr1 45244068 45244069 2415.57 chr1 45244069 45244070 2419.13 chr1 45244070 45244071 2424.3 chr1 45244071 45244072 2425.97 chr1 45244072 45244073 2426.47 chr1 45244073 45244074 2428.22 chr1 45244074 45244075 2434.29 chr1 45244075 45244076 2440.96 chr1 45244076 45244077 2446.61 chr1 45244077 45244078 2447.34 chr1 45244078 45244079 2452.88 chr1 45244079 45244080 2454.55 chr1 45244080 45244081 2440.94 chr1 45244081 45244082 1688.46 chr1 45244082 45244083 1117.54 chr1 45244083 45244084 973.405 chr1 45244084 45244085 867.672 chr1 45244085 45244086 879.672 chr1 45244086 45244087 845.005 chr1 45244087 45244088 714.116 chr1 45244088 45244089 677.66 chr1 45244089 45244090 657.166 chr1 45244090 45244091 595.499 chr1 45244091 45244092 458.959 chr1 45244092 45244093 347.204 chr1 45244093 45244094 369.347 chr1 45244094 45244095 378.097 chr1 45244095 45244096 381.872 chr1 45244096 45244097 382.576 chr1 45244097 45244098 1024.83 chr1 45244098 45244099 1679.08 chr1 45244099 45244100 13731.3 chr1 45244100 45244101 18094.1 chr1 45244101 45244102 18607.6 chr1 45244102 45244103 19737.3 chr1 45244103 45244104 20658.2 chr1 45244104 45244105 21083.2 chr1 45244105 45244106 21745.9 chr1 45244106 45244107 23348.9 chr1 45244107 45244108 24280.9 chr1 45244108 45244109 25008.5 chr1 45244109 45244110 25327.5 chr1 45244110 45244111 25767.5 chr1 45244111 45244112 26090.2 chr1 45244112 45244113 26107.1 chr1 45244113 45244114 26143.3 chr1 45244114 45244115 26119.2 chr1 45244115 45244116 26089.6 chr1 45244116 45244117 26054.4 chr1 45244117 45244118 25993 chr1 45244118 45244119 25946.2 chr1 45244119 45244120 25904.2 chr1 45244120 45244121 25878.8 chr1 45244121 45244122 25863.8 chr1 45244122 45244123 25851.6 chr1 45244123 45244124 25832.9 chr1 45244124 45244125 25809.6 chr1 45244125 45244126 25618.9 chr1 45244126 45244127 25264.4 chr1 45244127 45244128 720.628

Show raw plot data

RNA	U38B
Genomic coordinates	chr1:45244061-45244127 (+) (GRCh37)
Length	67
Sequence	Show sequence 45244061 GUCUCAGUGA UGAAAACUUU GUCCAGUUCU GCUACUGACA GUAAGUGAAG 45244111 AUAAAGUGUG UCUGAGG Download as FASTA
RNA structure	Show structure plot Download structure (RNAfold)
Expression information	Expression profile across tissues Read profile across tissues Expression per tissue RNA structure read coverage
Genome browser view	View in the genome browser

U38B

Expression profile across tissues

Read coverage profile across tissues

Expression profile per tissue

Expression: U38B | skin1

RNA structure (SAVoR) | skin1