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LSU-rRNA_Hsa

RNALSU-rRNA_Hsa
Genomic coordinateschr1:42779386-42779415 (+) (GRCh37)
Length30
SequenceShow sequence

Download as FASTA

RNA structureShow structure plot
Download structure (RNAfold)
Expression information
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Expression profile across tissues

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Download expression profile (CSV)

Read coverage profile across tissues



Expression profile per tissue

Select dataset from the expression table below to display tissue-specific sncRNA information:


TissueRead countRPM
wholeislet13.57738 0.88
wholeblood121.2544 0.07
testiculargerm1775.122 7.22
spleen11963.89 120.96
spermatozoa16.23991 1.06
skin2673.303 21.39
skin146345.8 253.98
serum21.20635 0.11
serum15.21587 0.69
plasma11.95144 0.09
peripheralbmc253.9067 5.62
peripheralbmc16.22222 1.80
pancreaticislet12578.18 28.57
pancreaticbetacell14225.47 58.90
pancreas10 0.00
muscle10 0.00
monocytemacrophage1124.092 13.97
lung20 0.00
lung114199.7 113.30
liver317.2544 0.54
liver20 0.00
liver11.79167 0.21
kidney24115.3 52.50
kidney19.80159 1.23
heart20 0.00
heart19.12183 0.49
colonrectum119.0544 0.87
coloncoecum1117.414 4.25
colonascendens160.5468 1.93
colon2374.386 7.07
colon1201.184 2.05
cd4plustcell110.0079 0.54
breast1185.127 12.12
braintgm18.4009 1.05
brainpfc286.2626 2.98
brainpfc116192.3 381.07
brainog10 0.00
bladder12438.2 83.17
bcellplasma12.40476 0.86
bcellnaive11.61905 0.56
bcellmemory12.03571 0.75
bcellgerminalcenter110.7302 3.11
adipose114.417 0.20
Download expression table (CSV)


Expression: LSU-rRNA_Hsa | skin1

Read count: 46345.8

5p entropy: 2.53616(max=4)

3p entropy: 0.481701(max=3.70044)

Read coverage: LSU-rRNA_Hsa | skin1

Show raw read coverage data (bedgraph) Show raw plot data

RNA structure (SAVoR) | skin1