HBII-420

Reverse strand
28905294 GAUGAGAAAU GCGGAUAUGG GACUGAGAC

Expression profile across tissues

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Download expression profile (CSV)

Read coverage profile across tissues

Tissue
Read count
RPM
wholeislet1
0
0.00
wholeblood1
883.008
2.77
testiculargerm1
91.2738
0.85
spleen1
123.442
7.60
spermatozoa1
0
0.00
skin2
4247.54
134.91
skin1
12504.8
68.53
serum2
16.819
1.59
serum1
385.134
51.04
plasma1
56.9014
2.67
peripheralbmc2
153.25
15.97
peripheralbmc1
16
4.62
pancreaticislet1
18138.7
200.98
pancreaticbetacell1
900.534
12.55
pancreas1
0
0.00
muscle1
0
0.00
monocytemacrophage1
47.3979
5.34
lung2
11
2.50
lung1
46742.2
372.97
liver3
21.65
0.67
liver2
6
2.23
liver1
3
0.35
kidney2
428.681
5.47
kidney1
17
2.13
heart2
0
0.00
heart1
8
0.43
colonrectum1
3
0.14
coloncoecum1
4.61667
0.17
colonascendens1
45.5114
1.45
colon2
2846.57
53.75
colon1
52.1174
0.53
cd4plustcell1
1025.48
55.20
breast1
13.8832
0.91
braintgm1
169.606
21.12
brainpfc2
26823.6
927.40
brainpfc1
486.49
11.45
brainog1
1
0.39
bladder1
667.677
22.78
bcellplasma1
5
1.78
bcellnaive1
7.02381
2.45
bcellmemory1
5.04762
1.87
bcellgerminalcenter1
8.5
2.47
adipose1
1264.07
17.54

Download expression table (CSV)
118231 reads
2017 reads per million
33 tissues
average 61 reads per million per tissue

Expression: HBII-420 | brainpfc2
Read count: 26823.6
5p entropy: 0.638729(max=3.32193)
3p entropy: 1.63904(max=4.08746)
Read coverage: HBII-420 | brainpfc2


Show raw read coverage data (bedgraph)

chr1	28905265	28905266	11380
chr1	28905266	28905267	26136.1
chr1	28905267	28905268	26695.3
chr1	28905268	28905269	26704.5
chr1	28905269	28905270	26731.5
chr1	28905270	28905271	26750.5
chr1	28905271	28905272	26803.8
chr1	28905272	28905273	26814.3
chr1	28905273	28905274	26821.1
chr1	28905274	28905275	26822.1
chr1	28905275	28905276	26823.6
chr1	28905276	28905277	26823.6
chr1	28905277	28905278	26818.5
chr1	28905278	28905279	26792
chr1	28905279	28905280	26730.5
chr1	28905280	28905281	26640.1
chr1	28905281	28905282	26519.9
chr1	28905282	28905283	26449.5
chr1	28905283	28905284	26249.4
chr1	28905284	28905285	25980.1
chr1	28905285	28905286	25912.6
chr1	28905286	28905287	25834.6
chr1	28905287	28905288	25437.9
chr1	28905288	28905289	24939.6
chr1	28905289	28905290	23384.6
chr1	28905290	28905291	4164
chr1	28905291	28905292	2746.5
chr1	28905292	28905293	2523.5
chr1	28905293	28905294	371

Show raw plot data

1	11380	G	28905266
2	26136.1	U
3	26695.3	C
4	26704.5	U
5	26731.5	C
6	26750.5	A
7	26803.8	G
8	26814.3	U
9	26821.1	C
10	26822.1	C	28905275
11	26823.6	C
12	26823.6	A
13	26818.5	U
14	26792	A
15	26730.5	U
16	26640.1	C
17	26519.9	C
18	26449.5	G
19	26249.4	C
20	25980.1	A	28905285
21	25912.6	U
22	25834.6	U
23	25437.9	U
24	24939.6	C
25	23384.6	U
26	4164	C
27	2746.5	A
28	2523.5	U
29	371	C

RNA structure (SAVoR) | brainpfc2