DASHR home

chr1.tRNA78-AspGTC

RNAchr1.tRNA78-AspGTC
Genomic coordinateschr1:161418032-161418104 (-) (GRCh37)
Length73
SequenceShow sequence

Download as FASTA

RNA structureShow structure plot
Download structure (RNAfold)
Expression information
Genome browser viewView in the genome browser



Expression profile across tissues

View plot in png format
View plot in the new window

View heatmap
Download expression profile (CSV)

Read coverage profile across tissues



Expression profile per tissue

Select dataset from the expression table below to display tissue-specific sncRNA information:


TissueRead countRPM
wholeislet113.0668 3.23
wholeblood1209.169 0.66
testiculargerm1414.357 3.86
spleen12399.79 147.80
spermatozoa127.8069 4.71
skin21162.97 36.94
skin14298.18 23.55
serum2104.45 9.87
serum186.3459 11.44
plasma1171.454 8.05
peripheralbmc2114.622 11.94
peripheralbmc178.3513 22.63
pancreaticislet1800.624 8.87
pancreaticbetacell1400.866 5.59
pancreas170.092 42.25
muscle16.23424 0.94
monocytemacrophage1404.991 45.60
lung2479.183 108.91
lung11411.52 11.26
liver338.5175 1.20
liver292.678 34.46
liver1133.819 15.53
kidney2848.336 10.82
kidney1178.317 22.35
heart29.97718 2.27
heart1916.202 49.69
colonrectum1100.927 4.62
coloncoecum173.9758 2.68
colonascendens1253.208 8.08
colon21144.73 21.62
colon1512.43 5.22
cd4plustcell12449.24 131.84
breast11745.27 114.29
braintgm1434.924 54.15
brainpfc21118.34 38.67
brainpfc114102 331.88
brainog123.7678 9.18
bladder1432.817 14.76
bcellplasma151.7699 18.43
bcellnaive123.1905 8.08
bcellmemory123.7458 8.78
bcellgerminalcenter147.1599 13.69
adipose1331.726 4.60
Download expression table (CSV)


Expression: chr1.tRNA78-AspGTC | brainpfc1

Read count: 14102

5p entropy: 1.19606(max=4.80735)

3p entropy: 3.24215(max=5.45943)

Read coverage: chr1.tRNA78-AspGTC | brainpfc1

Show raw read coverage data (bedgraph) Show raw plot data

RNA structure (SAVoR) | brainpfc1