chr1.tRNA35-GlyGCC

161413087 CAUCGGUGCA UGGGUGGUUC AGUGGUAGAA UUCUCGCCU

Expression profile across tissues

View plot in png format
View plot in the new window

View heatmap
Download expression profile (CSV)

Read coverage profile across tissues

Tissue
Read count
RPM
wholeislet1
23.1898
5.72
wholeblood1
979.976
3.07
testiculargerm1
29185.9
271.77
spleen1
12009
739.64
spermatozoa1
63.1172
10.70
skin2
23282.2
739.49
skin1
26672.9
146.17
serum2
161.93
15.31
serum1
91.0465
12.07
plasma1
490.951
23.04
peripheralbmc2
487.97
50.85
peripheralbmc1
1429.63
412.83
pancreaticislet1
4456.04
49.37
pancreaticbetacell1
4371.73
60.94
pancreas1
64.9815
39.17
muscle1
2.30957
0.35
monocytemacrophage1
425.829
47.95
lung2
116.305
26.43
lung1
5732.58
45.74
liver3
159.772
4.97
liver2
10.3652
3.85
liver1
75.9956
8.82
kidney2
2310.62
29.48
kidney1
135.456
16.98
heart2
9.45637
2.16
heart1
298.349
16.18
colonrectum1
63.5544
2.91
coloncoecum1
82.043
2.97
colonascendens1
1555.89
49.66
colon2
20039.6
378.42
colon1
1870.93
19.04
cd4plustcell1
24256.4
1305.74
breast1
3149.21
206.23
braintgm1
5372.51
668.94
brainpfc2
2533.05
87.58
brainpfc1
30423.9
716.00
brainog1
36.076
13.93
bladder1
841.232
28.70
bcellplasma1
40.1727
14.30
bcellnaive1
16.1821
5.64
bcellmemory1
16.1146
5.96
bcellgerminalcenter1
80.7703
23.44
adipose1
4770.57
66.21

Download expression table (CSV)
208195 reads
6378 reads per million
42 tissues
average 151 reads per million per tissue

Expression: chr1.tRNA35-GlyGCC | skin2
Read count: 23282.2
5p entropy: 0.671567(max=4.58496)
3p entropy: 1.77321(max=3.58496)
Read coverage: chr1.tRNA35-GlyGCC | skin2


Show raw read coverage data (bedgraph)

chr1	161413087	161413090	28.025
chr1	161413090	161413091	29.025
chr1	161413091	161413092	29.225
chr1	161413092	161413093	29.425
chr1	161413093	161413094	21496
chr1	161413094	161413095	21538.7
chr1	161413095	161413096	21586.1
chr1	161413096	161413097	21599.2
chr1	161413097	161413098	21599.3
chr1	161413098	161413099	21735.4
chr1	161413099	161413100	21780.4
chr1	161413100	161413101	21837.4
chr1	161413101	161413102	21881.5
chr1	161413102	161413103	21942.1
chr1	161413103	161413104	22043.5
chr1	161413104	161413105	22506.2
chr1	161413105	161413106	22586
chr1	161413106	161413107	22636.2
chr1	161413107	161413108	22713.8
chr1	161413108	161413109	22927.5
chr1	161413109	161413110	23000.7
chr1	161413110	161413111	23192.9
chr1	161413111	161413112	23266.4
chr1	161413112	161413113	23267.7
chr1	161413113	161413114	23256.1
chr1	161413114	161413115	23239.1
chr1	161413115	161413116	23212
chr1	161413116	161413117	23226.5
chr1	161413117	161413118	23177.1
chr1	161413118	161413119	23131.7
chr1	161413119	161413120	23065.1
chr1	161413120	161413121	22978.5
chr1	161413121	161413122	22805.9
chr1	161413122	161413123	22399.3
chr1	161413123	161413124	18762.2
chr1	161413124	161413125	9859.96
chr1	161413125	161413126	1505.14

Show raw plot data

1	0	C	161413087
2	28.025	A
3	28.025	U
4	28.025	C
5	29.025	G
6	29.225	G
7	29.425	U
8	21496	G
9	21538.7	C
10	21586.1	A	161413096
11	21599.2	U
12	21599.3	G
13	21735.4	G
14	21780.4	G
15	21837.4	U
16	21881.5	G
17	21942.1	G
18	22043.5	U
19	22506.2	U
20	22586	C	161413106
21	22636.2	A
22	22713.8	G
23	22927.5	U
24	23000.7	G
25	23192.9	G
26	23266.4	U
27	23267.7	A
28	23256.1	G
29	23239.1	A
30	23212	A	161413116
31	23226.5	U
32	23177.1	U
33	23131.7	C
34	23065.1	U
35	22978.5	C
36	22805.9	G
37	22399.3	C
38	18762.2	C
39	9859.96	U

RNA structure (SAVoR) | skin2