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chr1.tRNA80-GluCTC

RNAchr1.tRNA80-GluCTC
Genomic coordinateschr1:161417060-161417090 (-) (GRCh37)
Length31
SequenceShow sequence

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RNA structureShow structure plot
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Expression information
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Expression profile across tissues

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Download expression profile (CSV)

Read coverage profile across tissues



Expression profile per tissue

Select dataset from the expression table below to display tissue-specific sncRNA information:


TissueRead countRPM
adipose15653.93 78.46
bcellgerminalcenter1779.302 226.18
bcellmemory1326.131 120.64
bcellnaive1362.351 126.25
bcellplasma1618.218 220.12
bladder11308.48 44.63
brainog1290.536 112.16
brainpfc142537.8 1001.09
brainpfc22651.33 91.67
braintgm125238.8 3142.53
breast14909.77 321.52
cd4plustcell18023.61 431.92
colon12418.27 24.61
colon213100.7 247.39
colonascendens1708.274 22.61
coloncoecum1355.037 12.86
colonrectum1712.29 32.64
heart13239.57 175.69
heart2123.891 28.24
kidney11382.04 173.24
kidney23694.61 47.14
liver14489.71 521.08
liver258.5118 21.76
liver3711.793 22.12
lung14110.9 32.80
lung2532.454 121.02
monocytemacrophage11456.03 163.95
muscle126.5055 4.01
pancreas11133.59 683.30
pancreaticbetacell17352.05 102.48
pancreaticislet110257 113.65
peripheralbmc13829.24 1105.76
peripheralbmc2823.008 85.76
plasma1544.289 25.55
serum1143.483 19.01
serum21572.43 148.65
skin116426.4 90.02
skin228678.7 910.90
spermatozoa132.0382 5.43
spleen1894.614 55.10
testiculargerm1163021 1518.01
wholeblood1473.334 1.48
wholeislet192.2414 22.77
Download expression table (CSV)


Expression: chr1.tRNA80-GluCTC | testiculargerm1

Read count: 163021

5p entropy: 2.81444(max=3.58496)

3p entropy: 0.249603(max=4.24793)

Read coverage: chr1.tRNA80-GluCTC | testiculargerm1

Show raw read coverage data (bedgraph) Show raw plot data

RNA structure (SAVoR) | testiculargerm1