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chr1.tRNA116-GluCTC

RNAchr1.tRNA116-GluCTC
Genomic coordinateschr1:145399275-145399304 (-) (GRCh37)
Length30
SequenceShow sequence

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RNA structureShow structure plot
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Expression information
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Expression profile across tissues

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Download expression profile (CSV)

Read coverage profile across tissues



Expression profile per tissue

Select dataset from the expression table below to display tissue-specific sncRNA information:


TissueRead countRPM
adipose15653.4 78.46
bcellgerminalcenter1779.302 226.18
bcellmemory1326.131 120.64
bcellnaive1362.351 126.25
bcellplasma1618.218 220.12
bladder11308.38 44.63
brainog1289.821 111.89
brainpfc142465.2 999.39
brainpfc22650.57 91.64
braintgm125256.3 3144.71
breast14904.82 321.19
cd4plustcell18022.92 431.88
colon12417.7 24.61
colon213100.7 247.39
colonascendens1707.885 22.59
coloncoecum1354.873 12.86
colonrectum1712.317 32.64
heart13238.98 175.66
heart2123.891 28.24
kidney11381.46 173.17
kidney23693.52 47.12
liver14489.47 521.05
liver258.5118 21.76
liver3711.127 22.10
lung14084.28 32.59
lung2531.411 120.78
monocytemacrophage11343.79 151.31
muscle126.5055 4.01
pancreas11132.3 682.52
pancreaticbetacell17353.23 102.50
pancreaticislet110256.2 113.64
peripheralbmc13828.55 1105.56
peripheralbmc2823.393 85.80
plasma1543.873 25.53
serum1143.483 19.01
serum21572.45 148.65
skin116427.2 90.02
skin228679.2 910.91
spermatozoa132.0382 5.43
spleen1894.314 55.08
testiculargerm1163004 1517.85
wholeblood1473.334 1.48
wholeislet192.2414 22.77
Download expression table (CSV)


Expression: chr1.tRNA116-GluCTC | testiculargerm1

Read count: 163004

5p entropy: 2.81392(max=3.58496)

3p entropy: 0.247355(max=4.16993)

Read coverage: chr1.tRNA116-GluCTC | testiculargerm1

Show raw read coverage data (bedgraph) Show raw plot data

RNA structure (SAVoR) | testiculargerm1